Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905060.1_cds_XP_016455200.1_49151
CDS Infomation

[gene=LOC107779313] [db_xref=GeneID:107779313] [protein=pentatricopeptide repeat-containing protein At2g01860-like] [protein_id=XP_016455200.1] [location=32475..34004] [gbkey=CDS]
Sequence

ATGCTCACCAGGAGTTGTTGCATGTTTTCGACCTCCCATGAGGGCCTTCCTTGGTCTTCA
TCCACATATCCCATCTCACAGATTAGTAGTAGTCCCAGTACAGCTGCTTCTGAAATACCT
TCTTCAAGTCTTGGAAGAAGAGGGGAAAGAGTTGTTTTTATGGCTGTTTGTAGTAACAGA
ACTAACCACAGAAAACTCCCAAAGAACCTCAGCAATCCTCGGCGACCCAAGCTTCCACCT
GACATGGACTATATCTTTAAACGGTTCTTGTACGAGGATGCTGACGAGATTACCCAGCAG
CCAACTATTGATACTCTCACTGCTGCTGATGAGGAAGTTGATGAAGAATTGGAAGTGGAA
GTAGAAGAGACTGTATGGGAGTCGGATGAGATGGAAGCAATTTCATCTCTTTTCAAAGGG
AGGATCCCTCAGAAACCCGGAAAATTGAATAGAGAAAGGCCTCTGCCTCTGCCCCTTCCT
TACAAGATTCGACCTTTAGGACTTCCTACACCAAAGAGATTCTCAAATGTTTCAAGGCAA
TCCATATCAAAGCAAGTGTACAAGAATCCCACTTTCTTGATTGGTTTGGCCAAAGAAATT
CAGAGCCTTTCGACAGAGGAAAATGTATCAAAGGTTCTCAGTAAGTGGGGTCCATTTCTT
CGAAAAGGATCATTATCGTTGACAGTCAGAGAGTTGGGTTACTTGGGACTTCCTGAGAGA
GCTCTACAAACGTTCTGTTGGGTGAAGAAACAACCCCATCTTTTCCCGGATGATCATGTT
CTTGCTTCTACCATTGAAGTGTTGGCGGGGTCAAACGAGTTAAAAGTGCCTTTTGATTTG
GATAAGTTCACTGGCTTGGCTAGTCGGAGTGTGTATGAAGCAATGTTAAGGGGTTTCATC
AAAGGAGGAAGCCTGAAGCTTGCATTGAAGCTTCTCTCAATAGCTAAGGGATGTAATAGA
GTGCTTGGTACTGGGGTGTATGCTAAGCTAATATTGGAGCTTGGTAAGGATCCTGATAAA
AGAACGCTTGTCTTCGCATTGTTAGAGGAACTTGCTGCGAGAGATGATCTGGATTTGACA
CCACAAGACTGTACTGCTATCATGAAAACTTGCATTAGGCTGGGAAGATTCGAGATTGTG
GAGGGACTATATGATTGGTTCAGGAAATCTGGTGGCAATCCAAGTGTAGTTATGTATACT
ACTCTGATTCACTGTCGTTATTCAGAGAACAAACATAGGGAGGCGTTAGCCATGCTATGG
GAAATGGAGGCTTCAAATTGCCTTTTTGATCTTCCAGCTTATCGTGTAGTGATTAAGCTC
TTTGTTGGTTTGAACGATGTCCCAAGGGCTATACGCTATTTCTCTAAACTTAAGGAAGCA
GGTTTTAGTCCAACATTTGATATATACTGCAGCTTGATCAAAATCTATATGGCTGCTGGA
AGGCTGGCCAAGTGTGAAGATATCCGCAAGGAGGCAGAGATGGCTGGATTCAGGTTGGAC
GAACATACAATGTCAAAGTTGCAACAGTAA

Peptide Sequence

PEP ID

XP_016455200.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At2g01860-like [Nicotiana tabacum]
Sequence

MLTRSCCMFSTSHEGLPWSSSTYPISQISSSPSTAASEIPSSSLGRRGERVVFMAVCSNR
TNHRKLPKNLSNPRRPKLPPDMDYIFKRFLYEDADEITQQPTIDTLTAADEEVDEELEVE
VEETVWESDEMEAISSLFKGRIPQKPGKLNRERPLPLPLPYKIRPLGLPTPKRFSNVSRQ
SISKQVYKNPTFLIGLAKEIQSLSTEENVSKVLSKWGPFLRKGSLSLTVRELGYLGLPER
ALQTFCWVKKQPHLFPDDHVLASTIEVLAGSNELKVPFDLDKFTGLASRSVYEAMLRGFI
KGGSLKLALKLLSIAKGCNRVLGTGVYAKLILELGKDPDKRTLVFALLEELAARDDLDLT
PQDCTAIMKTCIRLGRFEIVEGLYDWFRKSGGNPSVVMYTTLIHCRYSENKHREALAMLW
EMEASNCLFDLPAYRVVIKLFVGLNDVPRAIRYFSKLKEAGFSPTFDIYCSLIKIYMAAG
RLAKCEDIRKEAEMAGFRLDEHTMSKLQQ

Transcript Sequence

Gene sequence data has not been registered.